Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444000_1164 | Not Available | Positive | 2769971 - 2770639 | 24966.2 |
| hypothetical protein | SAMN05444000_1165 | Not Available | Negative | 2770650 - 2770856 | 7441.9 |
| sulfoxide reductase catalytic subunit yedy | SAMN05444000_1166 | Not Available | Negative | 2770856 - 2771761 | 34139.9 |
| glutamate synthase domain-containing protein 2 | SAMN05444000_1167 | Not Available | Negative | 2771830 - 2773335 | 54776.5 |
| uncharacterized conserved protein, duf302 family | SAMN05444000_1168 | Not Available | Positive | 2773450 - 2773890 | 15884.0 |
| radical sam superfamily enzyme, moaa/nifb/pqqe/skfb family | SAMN05444000_1169 | Not Available | Positive | 2774172 - 2775665 | 55849.3 |
| hypothetical protein | SAMN05444000_11610 | Not Available | Positive | 2775665 - 2775766 | 3580.37 |
| hypothetical protein | SAMN05444000_11611 | Not Available | Positive | 2776138 - 2776518 | 13886.9 |
| multidrug resistance efflux pump | SAMN05444000_11612 | Not Available | Positive | 2776511 - 2777704 | 42675.6 |
| atp-dependent clp protease atp-binding subunit clpb | SAMN05444000_11613 | Not Available | Negative | 2777815 - 2780430 | 95035.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
