Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444000_11552 | Not Available | Negative | 2699293 - 2699958 | 23583.6 |
| hypothetical protein | SAMN05444000_11553 | Not Available | Negative | 2700109 - 2700378 | 10190.2 |
| glutamate-ammonia-ligase adenylyltransferase | SAMN05444000_11554 | Not Available | Negative | 2700382 - 2703165 | 101438.0 |
| protein of unknown function | SAMN05444000_11555 | Not Available | Negative | 2703235 - 2703609 | 13788.2 |
| cys-trna(pro) deacylase, prolyl-trna editing enzyme ybak/ebsc | SAMN05444000_11556 | Not Available | Positive | 2703703 - 2704170 | 15990.1 |
| protein of unknown function | SAMN05444000_11557 | Not Available | Positive | 2704333 - 2704764 | 16326.2 |
| rdd family protein | SAMN05444000_11558 | Not Available | Positive | 2704842 - 2705300 | 16935.9 |
| arginine-trna-protein transferase | SAMN05444000_11559 | Not Available | Positive | 2705409 - 2706230 | 30960.7 |
| tripartite atp-independent transporter, dctm component | SAMN05444000_11560 | Not Available | Negative | 2706371 - 2708725 | 82662.0 |
| hypothetical protein | SAMN05444000_11561 | Not Available | Negative | 2708743 - 2709657 | 35054.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
