Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| moxr-like atpase | SAMN05444000_11542 | Not Available | Positive | 2691365 - 2692204 | 31777.0 |
| ribosomal protein s18 acetylase rimi | SAMN05444000_11543 | Not Available | Positive | 2692358 - 2692816 | 17460.4 |
| protein of unknown function | SAMN05444000_11544 | Not Available | Positive | 2692816 - 2694177 | 49955.6 |
| hypothetical protein | SAMN05444000_11545 | Not Available | Positive | 2694183 - 2694350 | 5877.68 |
| hypothetical protein | SAMN05444000_11546 | Not Available | Positive | 2694355 - 2695539 | 45823.4 |
| uncharacterized conserved protein | SAMN05444000_11547 | Not Available | Positive | 2695619 - 2696011 | 14013.4 |
| membrane protein deda, snare-associated domain | SAMN05444000_11548 | Not Available | Positive | 2696076 - 2696711 | 22742.3 |
| putative metalloprotease | SAMN05444000_11549 | Not Available | Positive | 2696748 - 2697440 | 25326.9 |
| pin domain-containing protein | SAMN05444000_11550 | Not Available | Negative | 2697516 - 2698058 | 19982.3 |
| sam-dependent methyltransferase | SAMN05444000_11551 | Not Available | Negative | 2698055 - 2699251 | 42608.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
