Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aconitase | SAMN05444000_101244 | Not Available | Negative | 256199 - 258991 | 100722.0 |
| uncharacterized conserved protein, laba/duf88 family | SAMN05444000_101245 | Not Available | Negative | 259424 - 259996 | 21914.3 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase | SAMN05444000_101246 | Not Available | Positive | 260132 - 260707 | 20822.0 |
| dna-directed rna polymerase subunit omega | SAMN05444000_101247 | Not Available | Positive | 260784 - 261137 | 13038.2 |
| gtp pyrophosphokinase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | SAMN05444000_101248 | Not Available | Positive | 261166 - 263301 | 80763.6 |
| hypothetical protein | SAMN05444000_101249 | Not Available | Positive | 263320 - 263985 | 24611.9 |
| pyridoxine 5'-phosphate synthase | SAMN05444000_101250 | Not Available | Positive | 264053 - 264787 | 26876.2 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05444000_101251 | Not Available | Positive | 264787 - 265404 | 21413.8 |
| hypothetical protein | SAMN05444000_101252 | Not Available | Positive | 265407 - 265856 | 15980.9 |
| holo-[acyl-carrier protein] synthase | SAMN05444000_101253 | Not Available | Positive | 265853 - 266290 | 15894.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
