Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444000_1151 | Not Available | Positive | 2650698 - 2650790 | 3190.78 |
| hypothetical protein | SAMN05444000_1152 | Not Available | Positive | 2650828 - 2651046 | 8174.66 |
| phage integrase family protein | SAMN05444000_1153 | Not Available | Negative | 2651107 - 2652285 | 43650.8 |
| Trna-thr | Not Available | Not Available | Positive | 2652347 - 2652422 | Not Available |
| iron(iii) transport system permease protein | SAMN05444000_1155 | Not Available | Negative | 2652471 - 2654129 | 59256.3 |
| hypothetical protein | SAMN05444000_1156 | Not Available | Positive | 2654213 - 2655094 | 33133.3 |
| hypothetical protein | SAMN05444000_1157 | Not Available | Negative | 2655569 - 2655685 | 4410.33 |
| peptide/nickel transport system atp-binding protein | SAMN05444000_1158 | Not Available | Negative | 2655805 - 2657637 | 65456.6 |
| peptide/nickel transport system permease protein | SAMN05444000_1159 | Not Available | Negative | 2657641 - 2658564 | 32735.2 |
| peptide/nickel transport system permease protein | SAMN05444000_11510 | Not Available | Negative | 2658561 - 2659511 | 34020.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
