Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05444000_113126 | Not Available | Negative | 2521579 - 2522343 | 28071.8 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05444000_113127 | Not Available | Negative | 2522340 - 2523437 | 40008.4 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05444000_113128 | Not Available | Negative | 2523442 - 2524317 | 31008.0 |
| nadph:quinone reductase | SAMN05444000_113129 | Not Available | Negative | 2524395 - 2525429 | 36736.2 |
| transcriptional regulator, tetr family | SAMN05444000_113130 | Not Available | Negative | 2525440 - 2526105 | 24816.8 |
| hypothetical protein | SAMN05444000_113131 | Not Available | Positive | 2526438 - 2527883 | 52093.5 |
| hypothetical protein | SAMN05444000_113132 | Not Available | Positive | 2527932 - 2528042 | 4127.91 |
| sulfite exporter taue/safe | SAMN05444000_113133 | Not Available | Negative | 2528102 - 2528925 | 28349.0 |
| glucose-1-phosphate thymidylyltransferase | SAMN05444000_1141 | Not Available | Negative | 2529030 - 2529896 | 31673.7 |
| dtdp-4-dehydrorhamnose reductase | SAMN05444000_1142 | Not Available | Negative | 2529893 - 2530750 | 29908.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
