Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt transporter subunit cbtb | SAMN05444000_101223 | Not Available | Negative | 239296 - 239466 | 5887.14 |
| condensin subunit smc | SAMN05444000_101225 | Not Available | Positive | 239913 - 243368 | 126623.0 |
| hypothetical protein | SAMN05444000_101226 | Not Available | Positive | 243508 - 243858 | 12825.3 |
| lytic murein transglycosylase | SAMN05444000_101227 | Not Available | Negative | 243855 - 245024 | 43117.8 |
| adenosylcobinamide-phosphate synthase | SAMN05444000_101228 | Not Available | Negative | 245082 - 245993 | 32706.9 |
| l-threonine o-3-phosphate decarboxylase | SAMN05444000_101229 | Not Available | Negative | 245990 - 246940 | 34083.9 |
| response regulator receiver domain-containing protein | SAMN05444000_101230 | Not Available | Positive | 247115 - 247501 | 13918.5 |
| putative glutathione s-transferase | SAMN05444000_101231 | Not Available | Negative | 247459 - 248448 | 38066.4 |
| hypothetical protein | SAMN05444000_101232 | Not Available | Positive | 248627 - 248980 | 13105.4 |
| cystathione beta-lyase | SAMN05444000_101233 | Not Available | Negative | 248992 - 250164 | 43158.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
