Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssu ribosomal protein s5p | SAMN05444000_11346 | Not Available | Negative | 2443728 - 2444294 | 20367.7 |
| lsu ribosomal protein l18p | SAMN05444000_11347 | Not Available | Negative | 2444409 - 2444768 | 12831.6 |
| lsu ribosomal protein l6p | SAMN05444000_11348 | Not Available | Negative | 2444780 - 2445313 | 19249.2 |
| ssu ribosomal protein s8p | SAMN05444000_11349 | Not Available | Negative | 2445324 - 2445713 | 14041.9 |
| ssu ribosomal protein s14p | SAMN05444000_11350 | Not Available | Negative | 2445726 - 2446031 | 11737.5 |
| lsu ribosomal protein l5p | SAMN05444000_11351 | Not Available | Negative | 2446050 - 2446613 | 20867.4 |
| lsu ribosomal protein l24p | SAMN05444000_11352 | Not Available | Negative | 2446606 - 2446917 | 10873.3 |
| lsu ribosomal protein l14p | SAMN05444000_11353 | Not Available | Negative | 2446919 - 2447287 | 13412.6 |
| ssu ribosomal protein s17p | SAMN05444000_11354 | Not Available | Negative | 2447388 - 2447618 | 8723.59 |
| lsu ribosomal protein l29p | SAMN05444000_11355 | Not Available | Negative | 2447633 - 2447833 | 7552.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
