Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperone required for the assembly of the f1-atpase | SAMN05444000_11325 | Not Available | Negative | 2427576 - 2428286 | 26075.8 |
| phosphoglycolate phosphatase | SAMN05444000_11326 | Not Available | Negative | 2428288 - 2428962 | 23971.6 |
| 23s rrna pseudouridine955/2504/2580 synthase | SAMN05444000_11327 | Not Available | Negative | 2428959 - 2430002 | 38491.4 |
| camphor resistance protein crcb | SAMN05444000_11328 | Not Available | Negative | 2429999 - 2430376 | 13039.4 |
| putative atpase | SAMN05444000_11329 | Not Available | Negative | 2430466 - 2431776 | 48315.7 |
| do/deqq family serine protease | SAMN05444000_11330 | Not Available | Negative | 2431779 - 2433161 | 48561.6 |
| taurine catabolism dioxygenase taud, tfda family | SAMN05444000_11331 | Not Available | Negative | 2433245 - 2434078 | 30755.8 |
| taurine catabolism dioxygenase taud, tfda family | SAMN05444000_11332 | Not Available | Negative | 2434209 - 2435264 | 39335.8 |
| lsu ribosomal protein l17p | SAMN05444000_11333 | Not Available | Negative | 2435412 - 2435831 | 15767.2 |
| dna-directed rna polymerase subunit alpha | SAMN05444000_11334 | Not Available | Negative | 2436016 - 2437044 | 37602.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
