Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssu ribosomal protein s21p | SAMN05444000_101213 | Not Available | Negative | 231580 - 231786 | 8089.04 |
| ubiquinone biosynthesis protein coq9 | SAMN05444000_101214 | Not Available | Positive | 231896 - 232576 | 24869.2 |
| putative nad(p)h quinone oxidoreductase, pig3 family | SAMN05444000_101215 | Not Available | Positive | 232716 - 233699 | 34378.5 |
| transcriptional regulator, gntr family | SAMN05444000_101216 | Not Available | Negative | 233774 - 234541 | 29012.7 |
| hypothetical protein | SAMN05444000_101217 | Not Available | Positive | 234704 - 235915 | 43609.1 |
| hypothetical protein | SAMN05444000_101218 | Not Available | Negative | 236007 - 237221 | 43136.9 |
| hypothetical protein | SAMN05444000_101219 | Not Available | Positive | 237358 - 237684 | 12023.8 |
| putative acetyltransferase | SAMN05444000_101220 | Not Available | Negative | 237692 - 238150 | 16532.6 |
| predicted metal-binding protein | SAMN05444000_101221 | Not Available | Positive | 238229 - 238561 | 11901.5 |
| cobalt transporter subunit cbta | SAMN05444000_101222 | Not Available | Negative | 238591 - 239280 | 24265.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
