Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, asnc family | SAMN05444000_112104 | Not Available | Positive | 2375237 - 2375689 | 16777.8 |
| transcriptional regulator, asnc family | SAMN05444000_112105 | Not Available | Positive | 2375686 - 2376171 | 17796.6 |
| heme d1 biosynthesis radical sam protein nirj | SAMN05444000_112106 | Not Available | Positive | 2376176 - 2377390 | 45073.4 |
| cytochrome c oxidase, cbb3-type, subunit iii | SAMN05444000_112107 | Not Available | Positive | 2377365 - 2378927 | 57522.4 |
| sirohydrochlorin ferrochelatase | SAMN05444000_112108 | Not Available | Positive | 2378884 - 2379627 | 26272.5 |
| hypothetical protein | SAMN05444000_112109 | Not Available | Positive | 2379624 - 2379863 | 8904.97 |
| iron(iii) transport system permease protein | SAMN05444000_112110 | Not Available | Negative | 2379875 - 2381875 | 72885.2 |
| transcriptional regulator, gntr family | SAMN05444000_112111 | Not Available | Positive | 2382281 - 2382955 | 24904.0 |
| dipeptide transport system atp-binding protein | SAMN05444000_112112 | Not Available | Negative | 2382997 - 2383950 | 35128.6 |
| dipeptide transport system atp-binding protein | SAMN05444000_112113 | Not Available | Negative | 2383947 - 2384924 | 35532.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
