Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444000_11284 | Not Available | Positive | 2355775 - 2356290 | 17822.2 |
| feoc like transcriptional regulator | SAMN05444000_11285 | Not Available | Negative | 2356293 - 2356535 | 8829.53 |
| ferrous iron transport protein b | SAMN05444000_11286 | Not Available | Negative | 2356538 - 2358847 | 82339.5 |
| ferrous iron transport protein a | SAMN05444000_11287 | Not Available | Negative | 2358844 - 2359083 | 8646.61 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444000_11288 | Not Available | Positive | 2359333 - 2360016 | 25073.2 |
| protein of unknown function | SAMN05444000_11289 | Not Available | Positive | 2360026 - 2360586 | 20963.1 |
| hypothetical protein | SAMN05444000_11290 | Not Available | Negative | 2360579 - 2360851 | 9780.27 |
| nitric oxide reductase nore protein | SAMN05444000_11291 | Not Available | Negative | 2360856 - 2361407 | 20043.8 |
| nitric oxide reductase nord protein | SAMN05444000_11292 | Not Available | Negative | 2361404 - 2363341 | 72244.4 |
| nitric oxide reductase norq protein | SAMN05444000_11293 | Not Available | Negative | 2363350 - 2364162 | 29470.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
