Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized osmc-related protein | SAMN05444000_11264 | Not Available | Negative | 2335769 - 2336278 | 18865.6 |
| uncharacterized conserved protein, duf849 family | SAMN05444000_11265 | Not Available | Negative | 2336304 - 2337233 | 33539.3 |
| kynurenine formamidase | SAMN05444000_11266 | Not Available | Negative | 2337238 - 2338014 | 28404.8 |
| trap transporter, dctm subunit | SAMN05444000_11267 | Not Available | Negative | 2338030 - 2339337 | 45526.8 |
| trap-type mannitol/chloroaromatic compound transport system, small permease component | SAMN05444000_11268 | Not Available | Negative | 2339334 - 2339906 | 20799.0 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05444000_11269 | Not Available | Negative | 2340003 - 2341076 | 37936.0 |
| transcriptional regulator, tetr family | SAMN05444000_11270 | Not Available | Negative | 2341117 - 2341773 | 23479.9 |
| thiamine biosynthesis lipoprotein | SAMN05444000_11271 | Not Available | Negative | 2341993 - 2342901 | 31934.0 |
| copper chaperone nosl | SAMN05444000_11272 | Not Available | Negative | 2342898 - 2343419 | 18228.9 |
| cu-processing system permease protein | SAMN05444000_11273 | Not Available | Negative | 2343416 - 2344237 | 28243.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
