Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein involved in response to no | SAMN05444000_11243 | Not Available | Negative | 2315493 - 2316587 | 39520.3 |
| predicted metal-binding protein | SAMN05444000_11245 | Not Available | Positive | 2316988 - 2317380 | 14149.8 |
| cobalamin biosynthesis protein cobw | SAMN05444000_11246 | Not Available | Positive | 2317367 - 2318404 | 37298.4 |
| cobaltochelatase cobn subunit | SAMN05444000_11247 | Not Available | Positive | 2318411 - 2321713 | 118574.0 |
| precorrin-3b synthase | SAMN05444000_11248 | Not Available | Positive | 2321710 - 2322843 | 40701.9 |
| precorrin-8x methylmutase | SAMN05444000_11249 | Not Available | Positive | 2322843 - 2323472 | 22299.9 |
| precorrin-2 c20-methyltransferase | SAMN05444000_11250 | Not Available | Positive | 2323475 - 2324197 | 26627.5 |
| precorrin-3 methyltransferase | SAMN05444000_11251 | Not Available | Positive | 2324194 - 2324949 | 27034.6 |
| hypothetical protein | SAMN05444000_11252 | Not Available | Positive | 2324961 - 2325788 | 29728.3 |
| precorrin-6y c5,15-methyltransferase (decarboxylating) | SAMN05444000_11253 | Not Available | Positive | 2325781 - 2326980 | 42436.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
