Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh dehydrogenase subunit a | SAMN05444000_11174 | Not Available | Positive | 2224273 - 2224638 | 13887.4 |
| nadh dehydrogenase subunit b | SAMN05444000_11175 | Not Available | Positive | 2224629 - 2225165 | 19658.8 |
| nadh dehydrogenase subunit c | SAMN05444000_11176 | Not Available | Positive | 2225162 - 2225767 | 23341.7 |
| nadh dehydrogenase subunit d | SAMN05444000_11177 | Not Available | Positive | 2225767 - 2226990 | 45995.2 |
| nadh dehydrogenase subunit e | SAMN05444000_11178 | Not Available | Positive | 2226990 - 2228129 | 40679.3 |
| hypothetical protein | SAMN05444000_11179 | Not Available | Positive | 2228133 - 2228360 | 8281.48 |
| nadh dehydrogenase subunit f | SAMN05444000_11180 | Not Available | Positive | 2228366 - 2229661 | 47239.7 |
| hypothetical protein | SAMN05444000_11181 | Not Available | Positive | 2229668 - 2230072 | 14723.7 |
| hypothetical protein | SAMN05444000_11182 | Not Available | Positive | 2230162 - 2230563 | 14204.4 |
| hypothetical protein | SAMN05444000_11183 | Not Available | Positive | 2230563 - 2231000 | 16234.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
