Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsq | SAMN05444000_11114 | Not Available | Positive | 2156671 - 2157546 | 32909.4 |
| cell division protein ftsa | SAMN05444000_11115 | Not Available | Positive | 2157543 - 2158877 | 48144.8 |
| cell division protein ftsz | SAMN05444000_11116 | Not Available | Positive | 2159225 - 2160853 | 57166.7 |
| udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | SAMN05444000_11117 | Not Available | Positive | 2161205 - 2161984 | 27305.8 |
| beta-barrel assembly machine subunit bamd | SAMN05444000_11118 | Not Available | Positive | 2162096 - 2162950 | 32569.2 |
| dna replication and repair protein recn | SAMN05444000_11119 | Not Available | Positive | 2162978 - 2164624 | 58371.4 |
| chloride channel protein, cic family | SAMN05444000_11120 | Not Available | Positive | 2164699 - 2166387 | 59174.1 |
| uncharacterized conserved protein, duf427 family | SAMN05444000_11121 | Not Available | Negative | 2166494 - 2166841 | 13059.4 |
| xaa-pro aminopeptidase | SAMN05444000_11122 | Not Available | Negative | 2166879 - 2168684 | 66171.4 |
| cobaltochelatase cobt subunit | SAMN05444000_11123 | Not Available | Negative | 2168787 - 2170658 | 69334.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
