Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444000_110134 | Not Available | Negative | 2128705 - 2129268 | 21106.6 |
| hint domain-containing protein | SAMN05444000_110135 | Not Available | Negative | 2129485 - 2130573 | 38725.0 |
| hydroxymethylbilane synthase | SAMN05444000_110136 | Not Available | Negative | 2130712 - 2131671 | 34392.1 |
| uroporphyrinogen decarboxylase | SAMN05444000_110137 | Not Available | Positive | 2131878 - 2132912 | 37368.6 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN05444000_110138 | Not Available | Negative | 2133031 - 2133723 | 26099.5 |
| carbon monoxide dehydrogenase subunit g | SAMN05444000_110139 | Not Available | Positive | 2133824 - 2134270 | 16488.0 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05444000_110140 | Not Available | Negative | 2134298 - 2135380 | 38040.8 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05444000_110141 | Not Available | Negative | 2135391 - 2136218 | 28367.0 |
| acyl-coa dehydrogenase/hypothetical protein | SAMN05444000_110142 | Not Available | Negative | 2136225 - 2137373 | 42593.9 |
| acyl dehydratase | SAMN05444000_110143 | Not Available | Negative | 2137390 - 2137806 | 14600.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
