Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fmn-dependent nadh-azoreductase | SAMN05444000_11083 | Not Available | Negative | 2083237 - 2083779 | 18972.5 |
| transcriptional regulator, lysr family | SAMN05444000_11084 | Not Available | Positive | 2083898 - 2084782 | 32477.8 |
| eama-like transporter family protein | SAMN05444000_11085 | Not Available | Positive | 2084779 - 2085660 | 31713.8 |
| hypothetical protein | SAMN05444000_11086 | Not Available | Positive | 2085722 - 2085925 | 7343.96 |
| hypothetical protein | SAMN05444000_11087 | Not Available | Negative | 2085976 - 2086275 | 11408.0 |
| transcriptional regulator, arsr family | SAMN05444000_11088 | Not Available | Negative | 2086272 - 2086616 | 12805.3 |
| hypothetical protein | SAMN05444000_11089 | Not Available | Negative | 2086656 - 2086880 | 8466.35 |
| lysr family transcriptional regulator, glycine cleavage system transcriptional activator | SAMN05444000_11090 | Not Available | Positive | 2086988 - 2087884 | 33509.9 |
| atp synthase protein i | SAMN05444000_11091 | Not Available | Positive | 2088056 - 2088415 | 13144.0 |
| atp synthase f0 subcomplex a subunit | SAMN05444000_11092 | Not Available | Positive | 2088419 - 2089177 | 27298.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
