Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444000_11072 | Not Available | Negative | 2076124 - 2076456 | 11971.9 |
| trna (guanine37-n(1)-) methyltransferase | SAMN05444000_11073 | Not Available | Negative | 2076532 - 2077368 | 30853.9 |
| hypothetical protein | SAMN05444000_11074 | Not Available | Negative | 2077451 - 2078260 | 30511.9 |
| 16s rrna processing protein rimm | SAMN05444000_11075 | Not Available | Negative | 2078261 - 2078764 | 17588.8 |
| ssu ribosomal protein s16p | SAMN05444000_11076 | Not Available | Negative | 2078979 - 2079371 | 14386.0 |
| chorismate mutase | SAMN05444000_11077 | Not Available | Negative | 2079447 - 2079776 | 12527.0 |
| protein n-acetyltransferase, rimj/riml family | SAMN05444000_11078 | Not Available | Negative | 2079733 - 2080338 | 22780.9 |
| protein n-acetyltransferase, rimj/riml family | SAMN05444000_11079 | Not Available | Negative | 2080338 - 2080889 | 20546.2 |
| signal recognition particle subunit ffh/srp54 (srp54) | SAMN05444000_11080 | Not Available | Negative | 2080894 - 2082408 | 54101.9 |
| ala-trna(pro) deacylase | SAMN05444000_11082 | Not Available | Positive | 2082664 - 2083200 | 19705.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
