Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nlpc/p60 family protein | SAMN05444000_11022 | Not Available | Negative | 2028667 - 2029503 | 30204.7 |
| leucyl aminopeptidase | SAMN05444000_11023 | Not Available | Negative | 2029503 - 2030885 | 48852.5 |
| hypothetical protein | SAMN05444000_11024 | Not Available | Negative | 2031063 - 2031443 | 14245.2 |
| carbonic anhydrase | SAMN05444000_11025 | Not Available | Positive | 2031592 - 2032242 | 24036.5 |
| hypothetical protein | SAMN05444000_11026 | Not Available | Negative | 2032346 - 2032480 | 5123.2 |
| aspartate semialdehyde dehydrogenase | SAMN05444000_11027 | Not Available | Negative | 2033009 - 2034031 | 37374.5 |
| mannosyltransferase | SAMN05444000_11028 | Not Available | Negative | 2034153 - 2035166 | 36614.8 |
| major facilitator superfamily protein | SAMN05444000_11029 | Not Available | Negative | 2035174 - 2036346 | 41012.3 |
| aromatic-l-amino-acid decarboxylase | SAMN05444000_11030 | Not Available | Negative | 2036435 - 2037847 | 52194.1 |
| transcriptional regulator, marr family | SAMN05444000_11031 | Not Available | Positive | 2037949 - 2038389 | 16533.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
