Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssu ribosomal protein s21p | SAMN05444000_1102 | Not Available | Positive | 2007670 - 2007870 | 7872.72 |
| moxr-like atpase | SAMN05444000_1103 | Not Available | Positive | 2008511 - 2009425 | 33701.5 |
| hypothetical protein | SAMN05444000_1104 | Not Available | Positive | 2009425 - 2010675 | 46449.9 |
| hypothetical protein | SAMN05444000_1105 | Not Available | Positive | 2010742 - 2011197 | 15957.9 |
| carbon-monoxide dehydrogenase small subunit | SAMN05444000_1106 | Not Available | Positive | 2011258 - 2011728 | 16575.9 |
| carbon-monoxide dehydrogenase large subunit | SAMN05444000_1107 | Not Available | Positive | 2011751 - 2014111 | 83885.7 |
| carbon-monoxide dehydrogenase medium subunit | SAMN05444000_1108 | Not Available | Positive | 2014124 - 2014918 | 26676.6 |
| hypothetical protein | SAMN05444000_1109 | Not Available | Negative | 2015364 - 2015549 | 6857.1 |
| hypothetical protein | SAMN05444000_11010 | Not Available | Negative | 2015881 - 2016198 | 11885.2 |
| protein of unknown function | SAMN05444000_11011 | Not Available | Negative | 2016207 - 2016701 | 16636.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
