Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia gijangensis
Accession NumberFQZQ00000000.1
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Putative tail tape measure protein | SAMN05444000_103206 | Not Available | + | 803063 - 803719 | 22547.0 |
| Tail protein | SAMN05444000_103207 | Not Available | + | 803734 - 804366 | 23727.8 |
| Minor tail protein | SAMN05444000_103208 | Not Available | + | 804366 - 805253 | 32290.1 |
| Gta-like protein | SAMN05444000_103209 | Not Available | + | 805250 - 805681 | 15978.2 |
| Tail protein | SAMN05444000_103210 | Not Available | + | 805685 - 809605 | 141689.0 |
| transcriptional regulator, trar/dksa family | SAMN05444000_103211 | Not Available | - | 809900 - 810238 | 12547.0 |
| Serine acetyltransferase | SAMN05444000_103212 | Not Available | + | 810324 - 811127 | 28970.0 |
| hypothetical protein | SAMN05444000_1011 | Not Available | + | 163 - 1305 | 43509.5 |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | + | 449 - 1922 | 18.01 |
| glutamate synthase domain-containing protein 2 | SAMN05444000_1012 | Not Available | + | 1390 - 2853 | 52992.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.