Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase (gnat) family protein | SAMN05444000_10960 | Not Available | Negative | 1918555 - 1919001 | 15569.9 |
| phenylalanyl-trna synthetase beta subunit | SAMN05444000_10961 | Not Available | Negative | 1919007 - 1921406 | 86089.2 |
| eama-like transporter family protein | SAMN05444000_10962 | Not Available | Positive | 1921560 - 1922408 | 29709.3 |
| protein of unknown function | SAMN05444000_10963 | Not Available | Positive | 1922494 - 1923627 | 42321.8 |
| gmp synthase (glutamine-hydrolysing) | SAMN05444000_10964 | Not Available | Negative | 1923634 - 1924407 | 27274.3 |
| phenylalanyl-trna synthetase, alpha subunit | SAMN05444000_10965 | Not Available | Negative | 1924529 - 1925599 | 39664.1 |
| predicted arabinose efflux permease, mfs family | SAMN05444000_10966 | Not Available | Positive | 1925787 - 1926995 | 42266.5 |
| lsu ribosomal protein l20p | SAMN05444000_10967 | Not Available | Negative | 1927073 - 1927438 | 13575.3 |
| lsu ribosomal protein l35p | SAMN05444000_10968 | Not Available | Negative | 1927450 - 1927650 | 7382.31 |
| hypothetical protein | SAMN05444000_10969 | Not Available | Negative | 1927759 - 1927983 | 7945.93 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
