Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, gntr family | SAMN05444000_10940 | Not Available | Positive | 1898791 - 1900248 | 54830.4 |
| sulfoacetaldehyde acetyltransferase | SAMN05444000_10941 | Not Available | Positive | 1900365 - 1902140 | 63441.6 |
| protein of unknown function | SAMN05444000_10942 | Not Available | Negative | 1902192 - 1902845 | 25569.4 |
| hypothetical protein | SAMN05444000_10943 | Not Available | Negative | 1902856 - 1903122 | 10098.7 |
| hypothetical protein | SAMN05444000_10944 | Not Available | Negative | 1903127 - 1904470 | 50577.0 |
| hypothetical protein | SAMN05444000_10945 | Not Available | Negative | 1904467 - 1905120 | 25090.9 |
| atpase family associated with various cellular activities (aaa) | SAMN05444000_10946 | Not Available | Negative | 1905117 - 1907054 | 70889.2 |
| hypothetical protein | SAMN05444000_10947 | Not Available | Negative | 1907051 - 1907320 | 9777.01 |
| hypothetical protein | SAMN05444000_10948 | Not Available | Negative | 1907394 - 1908515 | 42754.9 |
| hypothetical protein | SAMN05444000_10949 | Not Available | Negative | 1908717 - 1909793 | 40059.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
