Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444000_10920 | Not Available | Negative | 1880934 - 1881311 | 14034.0 |
| hypothetical protein | SAMN05444000_10921 | Not Available | Negative | 1881335 - 1882108 | 29946.3 |
| hypothetical protein | SAMN05444000_10922 | Not Available | Positive | 1882310 - 1883191 | 32420.8 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | SAMN05444000_10923 | Not Available | Positive | 1883266 - 1884243 | 35736.6 |
| dihydrofolate synthase / folylpolyglutamate synthase | SAMN05444000_10924 | Not Available | Positive | 1884240 - 1885514 | 45052.2 |
| hypothetical protein | SAMN05444000_10925 | Not Available | Negative | 1885473 - 1885709 | 8453.29 |
| cell division protein zape | SAMN05444000_10926 | Not Available | Negative | 1885770 - 1886837 | 39954.9 |
| predicted arabinose efflux permease, mfs family | SAMN05444000_10927 | Not Available | Positive | 1886970 - 1888205 | 43825.3 |
| ornithine cyclodeaminase | SAMN05444000_10928 | Not Available | Negative | 1888209 - 1889120 | 33173.3 |
| 2-haloacid dehalogenase | SAMN05444000_10929 | Not Available | Negative | 1889117 - 1889737 | 23552.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
