Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444000_108140 | Not Available | Negative | 1864928 - 1865854 | 33514.3 |
| hypothetical protein | SAMN05444000_1091 | Not Available | Positive | 1866021 - 1866188 | 6019.09 |
| hypothetical protein | SAMN05444000_1092 | Not Available | Negative | 1866360 - 1867133 | 29156.6 |
| hypothetical protein | SAMN05444000_1093 | Not Available | Positive | 1867422 - 1867742 | 12165.3 |
| hypothetical protein | SAMN05444000_1094 | Not Available | Positive | 1868160 - 1868555 | 15066.4 |
| Trna-phe | Not Available | Not Available | Positive | 1868794 - 1868868 | Not Available |
| hypothetical protein | SAMN05444000_1096 | Not Available | Negative | 1868950 - 1869132 | 6933.0 |
| ribonuclease, rne/rng family | SAMN05444000_1097 | Not Available | Negative | 1869129 - 1870154 | 36605.8 |
| septum formation protein | SAMN05444000_1098 | Not Available | Negative | 1870151 - 1870729 | 20749.1 |
| bacterial translation initiation factor 1 (bif-1) | SAMN05444000_1099 | Not Available | Negative | 1870773 - 1870991 | 8312.23 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
