Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444000_10878 | Not Available | Negative | 1805910 - 1806125 | 8304.04 |
| acetyltransferase (gnat) family protein | SAMN05444000_10880 | Not Available | Positive | 1806221 - 1807030 | 29086.6 |
| transcriptional regulator, arsr family | SAMN05444000_10881 | Not Available | Positive | 1807178 - 1807528 | 13327.0 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN05444000_10882 | Not Available | Positive | 1807521 - 1807928 | 15049.9 |
| nitroreductase | SAMN05444000_10883 | Not Available | Positive | 1808127 - 1808819 | 25819.8 |
| hypothetical protein | SAMN05444000_10884 | Not Available | Positive | 1808841 - 1809257 | 14874.9 |
| hypothetical protein | SAMN05444000_10885 | Not Available | Negative | 1809289 - 1809609 | 11460.4 |
| aminobenzoyl-glutamate utilization protein b | SAMN05444000_10886 | Not Available | Positive | 1809778 - 1811352 | 57349.5 |
| trimethylamine---corrinoid protein co-methyltransferase | SAMN05444000_10887 | Not Available | Negative | 1811368 - 1812879 | 54471.1 |
| hypothetical protein | SAMN05444000_10888 | Not Available | Positive | 1812993 - 1813454 | 17397.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
