Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444000_10848 | Not Available | Positive | 1774979 - 1775452 | 17167.3 |
| hypothetical protein | SAMN05444000_10849 | Not Available | Negative | 1775449 - 1776012 | 21204.3 |
| tade-like protein | SAMN05444000_10850 | Not Available | Negative | 1776015 - 1776551 | 19840.9 |
| flp pilus assembly protein tadg | SAMN05444000_10851 | Not Available | Negative | 1776548 - 1778188 | 60313.4 |
| glutamate dehydrogenase (nad(p)+) | SAMN05444000_10852 | Not Available | Positive | 1778503 - 1779933 | 52774.1 |
| hypothetical protein | SAMN05444000_10853 | Not Available | Positive | 1779937 - 1780527 | 21218.8 |
| hypothetical protein | SAMN05444000_10854 | Not Available | Positive | 1780629 - 1781537 | 32506.0 |
| sarcosine oxidase subunit beta | SAMN05444000_10855 | Not Available | Positive | 1781719 - 1782975 | 45714.6 |
| sarcosine oxidase subunit delta | SAMN05444000_10856 | Not Available | Positive | 1782988 - 1783260 | 10350.1 |
| sarcosine oxidase subunit alpha | SAMN05444000_10857 | Not Available | Positive | 1783257 - 1786190 | 105359.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
