Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane-anchored protein | SAMN05444000_10838 | Not Available | Positive | 1761562 - 1762842 | 47745.6 |
| sulphur transport | SAMN05444000_10839 | Not Available | Negative | 1762778 - 1763839 | 36242.6 |
| peptide/nickel transport system permease protein | SAMN05444000_10840 | Not Available | Negative | 1764045 - 1765013 | 35326.8 |
| peptide/nickel transport system permease protein | SAMN05444000_10841 | Not Available | Negative | 1765006 - 1766013 | 37704.3 |
| peptide/nickel transport system substrate-binding protein | SAMN05444000_10842 | Not Available | Negative | 1766114 - 1767814 | 60932.4 |
| peptide/nickel transport system atp-binding protein/glutathione transport system atp-binding protein | SAMN05444000_10843 | Not Available | Positive | 1768113 - 1769933 | 67198.5 |
| acetylornithine deacetylase | SAMN05444000_10844 | Not Available | Positive | 1769938 - 1771101 | 41907.9 |
| glycine/d-amino acid oxidase | SAMN05444000_10845 | Not Available | Positive | 1771108 - 1772451 | 47766.4 |
| hippurate hydrolase | SAMN05444000_10846 | Not Available | Positive | 1772478 - 1773644 | 42173.8 |
| hippurate hydrolase | SAMN05444000_10847 | Not Available | Positive | 1773673 - 1774836 | 41503.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
