Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444000_107174 | Not Available | Positive | 1721546 - 1722643 | 39544.1 |
| Trna-ser | Not Available | Not Available | Positive | 1722741 - 1722830 | Not Available |
| hint domain-containing protein | SAMN05444000_107176 | Not Available | Negative | 1723070 - 1723573 | 18673.5 |
| Trna-gly | Not Available | Not Available | Positive | 1723984 - 1724058 | Not Available |
| atp-binding cassette, subfamily b | SAMN05444000_1082 | Not Available | Positive | 1724316 - 1726115 | 64500.9 |
| bon domain-containing protein | SAMN05444000_1083 | Not Available | Positive | 1726180 - 1726602 | 14914.5 |
| fatty-acyl-coa synthase/long-chain acyl-coa synthetase | SAMN05444000_1084 | Not Available | Positive | 1726842 - 1728725 | 68597.8 |
| homodimeric glycerol 3-phosphate dehydrogenase (quinone) | SAMN05444000_1085 | Not Available | Positive | 1728848 - 1730407 | 57741.9 |
| glycerol kinase | SAMN05444000_1086 | Not Available | Positive | 1730468 - 1731952 | 53353.1 |
| hydroxypyruvate reductase | SAMN05444000_1087 | Not Available | Negative | 1731949 - 1733067 | 39002.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
