Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioester hydrolase | SAMN05444000_10793 | Not Available | Positive | 1646445 - 1646831 | 14735.9 |
| cell division and transport-associated protein tolq | SAMN05444000_10794 | Not Available | Positive | 1646947 - 1647615 | 24119.9 |
| cell division and transport-associated protein tolr | SAMN05444000_10795 | Not Available | Positive | 1647619 - 1648089 | 16327.0 |
| cell division and transport-associated protein tola | SAMN05444000_10796 | Not Available | Positive | 1648098 - 1649180 | 37913.9 |
| tolb protein | SAMN05444000_10797 | Not Available | Positive | 1649177 - 1650493 | 47442.4 |
| peptidoglycan-associated lipoprotein | SAMN05444000_10798 | Not Available | Positive | 1650569 - 1651081 | 18074.1 |
| tola-binding protein | SAMN05444000_10799 | Not Available | Positive | 1651098 - 1651940 | 29634.9 |
| trna(ile)-lysidine synthase | SAMN05444000_107100 | Not Available | Positive | 1651931 - 1653178 | 45022.5 |
| membrane protease ftsh catalytic subunit | SAMN05444000_107101 | Not Available | Positive | 1653279 - 1655213 | 69688.5 |
| trans-aconitate 2-methyltransferase | SAMN05444000_107102 | Not Available | Positive | 1655223 - 1656005 | 28616.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
