Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444000_10773 | Not Available | Positive | 1629347 - 1629625 | 10369.1 |
| etc complex i subunit conserved region | SAMN05444000_10774 | Not Available | Positive | 1630051 - 1630362 | 11457.5 |
| Trna-arg | Not Available | Not Available | Positive | 1630523 - 1630599 | Not Available |
| uncharacterized membrane protein | SAMN05444000_10776 | Not Available | Positive | 1630699 - 1631301 | 21599.1 |
| integrase/recombinase xerc | SAMN05444000_10777 | Not Available | Negative | 1631326 - 1632240 | 32708.5 |
| hypothetical protein | SAMN05444000_10778 | Not Available | Negative | 1632237 - 1632944 | 26108.1 |
| transaldolase | SAMN05444000_10779 | Not Available | Negative | 1633119 - 1633772 | 23075.9 |
| replication restart dna helicase pria | SAMN05444000_10780 | Not Available | Positive | 1633889 - 1636084 | 80092.7 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444000_10781 | Not Available | Positive | 1636220 - 1636990 | 27325.6 |
| sulphur transport | SAMN05444000_10782 | Not Available | Negative | 1637000 - 1638064 | 36257.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
