Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gdsl-like lipase/acylhydrolase family protein | SAMN05444000_101132 | Not Available | Positive | 137731 - 138417 | 24521.9 |
| methyltransferase domain-containing protein | SAMN05444000_101133 | Not Available | Negative | 138482 - 139294 | 30096.3 |
| fad dependent oxidoreductase | SAMN05444000_101134 | Not Available | Negative | 139336 - 140721 | 49709.4 |
| ssu ribosomal protein s15p | SAMN05444000_101135 | Not Available | Negative | 140866 - 141135 | 10297.6 |
| hemolysin-type calcium-binding repeat-containing protein | SAMN05444000_101137 | Not Available | Negative | 141292 - 142272 | 33125.0 |
| hypothetical protein | SAMN05444000_101138 | Not Available | Negative | 142387 - 142902 | 19173.9 |
| trna pseudouridine synthase b | SAMN05444000_101139 | Not Available | Negative | 142910 - 143917 | 36267.1 |
| uncharacterized protein yige, duf2233 family | SAMN05444000_101140 | Not Available | Negative | 143949 - 144683 | 26798.0 |
| ribosome-binding factor a | SAMN05444000_101141 | Not Available | Negative | 144680 - 145090 | 15243.4 |
| dihydrodipicolinate reductase | SAMN05444000_101142 | Not Available | Positive | 145175 - 145984 | 27982.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
