Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine betaine/proline transport system permease protein | SAMN05444000_10733 | Not Available | Negative | 1587417 - 1588334 | 33500.1 |
| glycine betaine/proline transport system atp-binding protein | SAMN05444000_10734 | Not Available | Negative | 1588346 - 1589365 | 37458.1 |
| glycine betaine/proline transport system substrate-binding protein | SAMN05444000_10735 | Not Available | Negative | 1589421 - 1590404 | 35066.9 |
| dna-binding transcriptional regulator, lysr family | SAMN05444000_10736 | Not Available | Positive | 1590928 - 1591863 | 34670.6 |
| uncharacterized conserved protein, duf1330 family | SAMN05444000_10737 | Not Available | Negative | 1591873 - 1592160 | 10642.7 |
| ssu ribosomal protein s12p methylthiotransferase | SAMN05444000_10738 | Not Available | Negative | 1592358 - 1593743 | 50775.2 |
| asma protein | SAMN05444000_10739 | Not Available | Positive | 1593897 - 1595822 | 66802.0 |
| drug resistance transporter, bcr/cfla subfamily | SAMN05444000_10740 | Not Available | Positive | 1595839 - 1597038 | 42021.3 |
| prephenate dehydrogenase | SAMN05444000_10741 | Not Available | Positive | 1597227 - 1598018 | 28323.6 |
| gcra cell cycle regulator | SAMN05444000_10742 | Not Available | Negative | 1598067 - 1598639 | 20446.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
