Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssu ribosomal protein s9p | SAMN05444000_106138 | Not Available | Negative | 1494762 - 1495247 | 17694.4 |
| lsu ribosomal protein l13p | SAMN05444000_106139 | Not Available | Negative | 1495251 - 1495712 | 17135.8 |
| hypothetical protein | SAMN05444000_106140 | Not Available | Positive | 1495888 - 1496130 | 9101.67 |
| hypothetical protein | SAMN05444000_106141 | Not Available | Positive | 1496132 - 1496527 | 13843.5 |
| uncharacterized domain 1-containing protein | SAMN05444000_106142 | Not Available | Negative | 1496541 - 1496966 | 15248.7 |
| enoyl-coa hydratase/carnithine racemase | SAMN05444000_106143 | Not Available | Positive | 1497023 - 1497808 | 28128.9 |
| methylenetetrahydrofolate--trna-(uracil-5-)- methyltransferase | SAMN05444000_106144 | Not Available | Positive | 1498031 - 1499476 | 52301.7 |
| methyltransferase domain-containing protein | SAMN05444000_106145 | Not Available | Positive | 1499513 - 1500127 | 21913.0 |
| glutamyl-q trna(asp) synthetase | SAMN05444000_106146 | Not Available | Positive | 1500127 - 1500966 | 31192.8 |
| phosphoribosyl-amp cyclohydrolase | SAMN05444000_106147 | Not Available | Negative | 1501016 - 1501375 | 13441.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
