Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444000_106128 | Not Available | Positive | 1485924 - 1486271 | 12571.0 |
| threonine/homoserine efflux transporter rhta | SAMN05444000_106129 | Not Available | Positive | 1486268 - 1487134 | 31135.1 |
| eama domain-containing membrane protein rard | SAMN05444000_106130 | Not Available | Positive | 1487276 - 1488211 | 33078.3 |
| hypothetical protein | SAMN05444000_106131 | Not Available | Positive | 1488323 - 1489192 | 32568.1 |
| homoserine o-succinyltransferase | SAMN05444000_106132 | Not Available | Positive | 1489226 - 1490149 | 35170.7 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444000_106133 | Not Available | Positive | 1490139 - 1491092 | 34898.1 |
| polyphosphate kinase 2, pa0141 family | SAMN05444000_106134 | Not Available | Positive | 1491134 - 1492003 | 33278.4 |
| transcriptional regulator, tetr family | SAMN05444000_106135 | Not Available | Positive | 1491996 - 1492613 | 22308.5 |
| methyltransferase, fkbm family | SAMN05444000_106136 | Not Available | Positive | 1492678 - 1493430 | 29039.2 |
| tellurite resistance protein | SAMN05444000_106137 | Not Available | Negative | 1493634 - 1494593 | 34275.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
