Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, ntrc family, nitrogen regulation sensor histidine kinase glnl | SAMN05444000_106108 | Not Available | Negative | 1466484 - 1467569 | 38878.7 |
| pp_01437 | SAMN05444000_106109 | Not Available | Negative | 1467566 - 1468567 | Not Available |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SAMN05444000_106110 | Not Available | Positive | 1468735 - 1469877 | 39713.1 |
| phosphatidylglycerophosphatase a | SAMN05444000_106111 | Not Available | Positive | 1469874 - 1470365 | 17370.3 |
| nicotinamide-nucleotide amidase | SAMN05444000_106112 | Not Available | Positive | 1470362 - 1470835 | 15892.0 |
| ammonium transporter | SAMN05444000_106113 | Not Available | Positive | 1471008 - 1472207 | 41981.8 |
| 2-methylcitrate dehydratase prpd | SAMN05444000_106114 | Not Available | Negative | 1472326 - 1473624 | 45636.6 |
| coenzyme q-binding protein coq10 | SAMN05444000_106115 | Not Available | Negative | 1473658 - 1474107 | 17068.4 |
| hypoxanthine phosphoribosyltransferase | SAMN05444000_106116 | Not Available | Positive | 1474175 - 1474714 | 20335.5 |
| hypothetical protein | SAMN05444000_106117 | Not Available | Positive | 1474711 - 1474890 | 6832.77 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
