Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein | SAMN05444000_10648 | Not Available | Negative | 1400627 - 1401529 | 32628.9 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05444000_10649 | Not Available | Positive | 1401693 - 1402331 | 23068.0 |
| sodium/proton antiporter, cpa1 family | SAMN05444000_10650 | Not Available | Positive | 1402414 - 1403679 | 44587.9 |
| trans-2,3-dihydro-3-hydroxyanthranilate isomerase | SAMN05444000_10651 | Not Available | Positive | 1403679 - 1404521 | 29600.2 |
| atp-dependent rna helicase rhle | SAMN05444000_10652 | Not Available | Negative | 1404576 - 1405925 | 48132.7 |
| manganese uptake regulator, fur family | SAMN05444000_10653 | Not Available | Positive | 1406243 - 1406653 | 15324.2 |
| dimethylglycine dehydrogenase | SAMN05444000_10654 | Not Available | Negative | 1406701 - 1409124 | 89282.5 |
| polyisoprenoid-binding protein ycei | SAMN05444000_10655 | Not Available | Negative | 1409232 - 1409795 | 20226.6 |
| dimethylglycine dehydrogenase | SAMN05444000_10656 | Not Available | Positive | 1409936 - 1412353 | 88799.9 |
| ctp:molybdopterin cytidylyltransferase moca | SAMN05444000_10657 | Not Available | Positive | 1412409 - 1413044 | 22738.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
