Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444000_1068 | Not Available | Negative | 1363087 - 1363737 | 23727.2 |
| hypothetical protein | SAMN05444000_1069 | Not Available | Negative | 1363737 - 1363979 | 9475.47 |
| transcriptional regulator, alpa family | SAMN05444000_10610 | Not Available | Negative | 1364191 - 1364385 | 7617.13 |
| hypothetical protein | SAMN05444000_10611 | Not Available | Negative | 1364492 - 1364899 | 15238.3 |
| site-specific recombinase xerd | SAMN05444000_10612 | Not Available | Negative | 1364896 - 1366146 | 47084.1 |
| tfox c-terminal domain-containing protein | SAMN05444000_10613 | Not Available | Positive | 1366426 - 1366653 | 8290.9 |
| nucleoside diphosphate kinase | SAMN05444000_10614 | Not Available | Negative | 1366870 - 1367292 | 15044.8 |
| atp-binding cassette, subfamily f, member 3 | SAMN05444000_10615 | Not Available | Positive | 1367423 - 1369270 | 67758.5 |
| multiple antibiotic resistance protein | SAMN05444000_10616 | Not Available | Positive | 1369287 - 1369907 | 21639.2 |
| aspartyl protease family protein | SAMN05444000_10617 | Not Available | Positive | 1369962 - 1370543 | 20773.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
