Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-cys | Not Available | Not Available | Positive | 1355624 - 1355697 | Not Available |
| heat shock protein hsp20 | SAMN05444000_105199 | Not Available | Negative | 1356223 - 1356639 | 15569.2 |
| hypothetical protein | SAMN05444000_105200 | Not Available | Negative | 1356841 - 1357026 | 6741.05 |
| adenylate cyclase | SAMN05444000_1061 | Not Available | Negative | 1357704 - 1359581 | 69451.0 |
| protein of unknown function | SAMN05444000_1062 | Not Available | Negative | 1359788 - 1360207 | 14929.8 |
| hypothetical protein | SAMN05444000_1063 | Not Available | Positive | 1360617 - 1360874 | 9641.87 |
| hypothetical protein | SAMN05444000_1064 | Not Available | Negative | 1361331 - 1361723 | 14383.9 |
| hypothetical protein | SAMN05444000_1065 | Not Available | Negative | 1361941 - 1362219 | 10282.6 |
| hypothetical protein | SAMN05444000_1066 | Not Available | Negative | 1362216 - 1362827 | 22957.6 |
| hypothetical protein | SAMN05444000_1067 | Not Available | Negative | 1362867 - 1363094 | 8953.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
