Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| taurine transport system atp-binding protein | SAMN05444000_105106 | Not Available | Positive | 1265223 - 1266029 | 29646.9 |
| taurine transport system permease protein | SAMN05444000_105107 | Not Available | Positive | 1266026 - 1267300 | 45386.8 |
| aldehyde dehydrogenase (nad+) | SAMN05444000_105108 | Not Available | Negative | 1267380 - 1268819 | 51591.1 |
| glycine/d-amino acid oxidase | SAMN05444000_105109 | Not Available | Positive | 1269099 - 1270370 | 45984.2 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444000_105110 | Not Available | Negative | 1270446 - 1271306 | 31938.7 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05444000_105111 | Not Available | Negative | 1271303 - 1272379 | 38405.3 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05444000_105112 | Not Available | Negative | 1272390 - 1273382 | 35049.6 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05444000_105113 | Not Available | Negative | 1273396 - 1274100 | 25358.7 |
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05444000_105114 | Not Available | Negative | 1274097 - 1274864 | 27508.2 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444000_105115 | Not Available | Negative | 1274934 - 1276130 | 43434.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
