Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444000_104233 | Not Available | Positive | 1130611 - 1131735 | 42310.9 |
| pap2 superfamily protein | SAMN05444000_104234 | Not Available | Positive | 1131852 - 1132907 | 39140.8 |
| predicted dithiol-disulfide isomerase, dsba family | SAMN05444000_104235 | Not Available | Negative | 1132942 - 1133592 | 23717.0 |
| hypothetical protein | SAMN05444000_104236 | Not Available | Negative | 1133678 - 1134607 | 33176.1 |
| phosphoribosyl 1,2-cyclic phosphate phosphodiesterase | SAMN05444000_104237 | Not Available | Negative | 1134612 - 1135412 | 29517.8 |
| tatd dnase family protein | SAMN05444000_104238 | Not Available | Negative | 1135409 - 1136215 | 29261.7 |
| dna polymerase iii, delta prime subunit | SAMN05444000_104239 | Not Available | Negative | 1136218 - 1137342 | 40183.1 |
| thymidylate kinase | SAMN05444000_104240 | Not Available | Negative | 1137339 - 1137965 | 22799.4 |
| d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6) | SAMN05444000_104241 | Not Available | Negative | 1137962 - 1139143 | 42418.3 |
| sporulation related domain-containing protein | SAMN05444000_104242 | Not Available | Negative | 1139167 - 1140033 | 30469.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
