Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted n-acetyltransferase yhbs | SAMN05444000_104203 | Not Available | Positive | 1103379 - 1103885 | 18042.0 |
| hypothetical protein | SAMN05444000_104204 | Not Available | Negative | 1103941 - 1104717 | 27741.7 |
| protein of unknown function | SAMN05444000_104205 | Not Available | Negative | 1104836 - 1105045 | 7700.39 |
| transcriptional regulator, lysr family | SAMN05444000_104206 | Not Available | Positive | 1105173 - 1106072 | 32574.5 |
| nadph2:quinone reductase | SAMN05444000_104207 | Not Available | Negative | 1106154 - 1107116 | 33720.9 |
| transcriptional regulator, xre family | SAMN05444000_104208 | Not Available | Positive | 1107417 - 1107782 | 13871.5 |
| histidinol-phosphatase, inositol monophosphatase family | SAMN05444000_104209 | Not Available | Positive | 1107887 - 1108636 | 26389.1 |
| cytosine/adenosine deaminase | SAMN05444000_104210 | Not Available | Positive | 1108755 - 1110089 | 47827.2 |
| hypothetical protein | SAMN05444000_104211 | Not Available | Negative | 1110119 - 1110295 | 6523.79 |
| Trna-gly | Not Available | Not Available | Positive | 1110389 - 1110463 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
