Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (adenine2030-n6)-methyltransferase | SAMN05444000_104172 | Not Available | Positive | 1074583 - 1075365 | 28902.7 |
| hypothetical protein | SAMN05444000_104173 | Not Available | Negative | 1075383 - 1075634 | 8871.22 |
| 2-isopropylmalate synthase | SAMN05444000_104174 | Not Available | Negative | 1075846 - 1077420 | 57150.6 |
| hypothetical protein | SAMN05444000_104175 | Not Available | Negative | 1077676 - 1078491 | 29352.5 |
| hypothetical protein | SAMN05444000_104176 | Not Available | Positive | 1078736 - 1079803 | 38120.9 |
| uncharacterized conserved protein | SAMN05444000_104177 | Not Available | Negative | 1079877 - 1081280 | 49767.4 |
| nad+ synthase | SAMN05444000_104178 | Not Available | Positive | 1081437 - 1083101 | 60911.6 |
| uncharacterized alpha/beta hydrolase domain | SAMN05444000_104179 | Not Available | Positive | 1083409 - 1084470 | 39921.6 |
| nitroreductase | SAMN05444000_104180 | Not Available | Negative | 1084519 - 1085193 | 25144.4 |
| hypothetical protein | SAMN05444000_104181 | Not Available | Negative | 1085198 - 1086307 | 41760.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
