Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | SAMN05444000_104122 | Not Available | Negative | 1024253 - 1025014 | 28220.1 |
| hypothetical protein | SAMN05444000_104123 | Not Available | Negative | 1025016 - 1025963 | 33369.0 |
| nucleoside abc transporter membrane protein | SAMN05444000_104124 | Not Available | Negative | 1026017 - 1026985 | 34568.2 |
| nucleoside abc transporter membrane protein | SAMN05444000_104125 | Not Available | Negative | 1026985 - 1028079 | 39346.2 |
| nucleoside abc transporter atp-binding protein | SAMN05444000_104126 | Not Available | Negative | 1028081 - 1029673 | 58054.2 |
| hypothetical protein | SAMN05444000_104127 | Not Available | Negative | 1029670 - 1030026 | 12968.2 |
| nucleoside-binding protein | SAMN05444000_104128 | Not Available | Negative | 1030092 - 1031096 | 35004.4 |
| ribosomal-protein-alanine n-acetyltransferase | SAMN05444000_104129 | Not Available | Negative | 1031257 - 1031670 | 14844.5 |
| trna threonylcarbamoyl adenosine modification protein yeaz | SAMN05444000_104130 | Not Available | Negative | 1031667 - 1032248 | 19780.7 |
| fe-s cluster biogenesis protein nfua, 4fe-4s-binding domain | SAMN05444000_104131 | Not Available | Negative | 1032238 - 1032801 | 19815.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
