Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-coa synthetase (adp-forming) beta subunit | SAMN05444000_10492 | Not Available | Negative | 995233 - 996429 | 42514.0 |
| nucleotide-diphospho-sugar transferase | SAMN05444000_10493 | Not Available | Negative | 996582 - 997466 | 33227.6 |
| malate dehydrogenase (nad) | SAMN05444000_10494 | Not Available | Negative | 997466 - 998428 | 33286.5 |
| hypothetical protein | SAMN05444000_10495 | Not Available | Positive | 998634 - 998840 | 7387.03 |
| hypothetical protein | SAMN05444000_10496 | Not Available | Positive | 998890 - 999630 | 26241.8 |
| hypothetical protein | SAMN05444000_10497 | Not Available | Negative | 999643 - 999954 | 10816.0 |
| (3s)-malyl-coa thioesterase | SAMN05444000_10498 | Not Available | Positive | 1000129 - 1000983 | 30571.6 |
| nnru protein | SAMN05444000_10499 | Not Available | Positive | 1001016 - 1001564 | 19849.2 |
| hypothetical protein | SAMN05444000_104100 | Not Available | Positive | 1001569 - 1001772 | 7582.92 |
| l-erythro-3-methylmalyl-coa dehydratase | SAMN05444000_104101 | Not Available | Positive | 1001773 - 1002804 | 37553.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
