Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | 1D132 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium fabrum strain 1D132 chromosome linear, complete
Gene Summary
Adenine Count
409533 bp
Thymine Count
410307 bp
Guanine Count
595904 bp
Cytosine Count
598154 bp
Genome Length
2013898 bp
Protein-coding Genes
1760 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | At1D132_RS16090 | Not Available | Negative | 286267 - 287142 | 31643.8 |
| abc transporter permease | At1D132_RS16095 | Not Available | Negative | 287142 - 288083 | 33926.8 |
| abc transporter substrate-binding protein | At1D132_RS16105 | Not Available | Negative | 288413 - 289939 | 55682.2 |
| glycosyltransferase family 4 protein | At1D132_RS16115 | Not Available | Positive | 290378 - 291502 | 42217.7 |
| polysaccharide biosynthesis/export family protein | At1D132_RS16120 | Not Available | Positive | 291979 - 293175 | 42557.7 |
| efflux rnd transporter periplasmic adaptor subunit | At1D132_RS16125 | Not Available | Positive | 293442 - 294719 | 44909.6 |
| efflux rnd transporter permease subunit | At1D132_RS16130 | Not Available | Positive | 294716 - 297856 | 111460.0 |
| Tmrna,resume consensus sequence (at 216): tatagccgccgaaggaca | Not Available | Not Available | Positive | 296757 - 297133 | Not Available |
| invasion associated locus b family protein | At1D132_RS16135 | Not Available | Negative | 297853 - 298431 | 20322.7 |
| autotransporter domain-containing protein | At1D132_RS16140 | Not Available | Negative | 298431 - 302405 | 130349.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

