Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3408 domain-containing protein | ALFI_RS04885 | Not Available | Positive | 1073257 - 1073697 | 16881.0 |
| duf3408 domain-containing protein | ALFI_RS16875 | Not Available | Positive | 1073719 - 1074258 | 19828.4 |
| hypothetical protein | ALFI_RS04895 | Not Available | Positive | 1074429 - 1074782 | 12094.1 |
| duf4134 domain-containing protein | ALFI_RS04900 | Not Available | Positive | 1074926 - 1075222 | 10373.9 |
| group ii intron reverse transcriptase/maturase | ALFI_RS04905 | Not Available | Positive | 1075840 - 1077657 | 70721.8 |
| duf4133 domain-containing protein | ALFI_RS04910 | Not Available | Positive | 1077660 - 1078043 | 14534.3 |
| multidrug dmt transporter permease | ALFI_RS04915 | Not Available | Positive | 1078048 - 1078974 | 35573.2 |
| group ii intron reverse transcriptase/maturase | ALFI_RS04920 | Not Available | Positive | 1079635 - 1081236 | 62194.6 |
| multidrug dmt transporter permease | ALFI_RS04925 | Not Available | Positive | 1081236 - 1082936 | 64865.6 |
| duf3876 domain-containing protein | ALFI_RS04930 | Not Available | Positive | 1082948 - 1083307 | 13737.6 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
