Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfa1 family fimbria major subunit | ALFI_RS04835 | Not Available | Negative | 1062197 - 1063534 | 48103.3 |
| duf3575 domain-containing protein | ALFI_RS04840 | Not Available | Negative | 1063632 - 1064921 | 49269.0 |
| helix-turn-helix transcriptional regulator | ALFI_RS04845 | Not Available | Negative | 1064941 - 1065426 | 18934.3 |
| hypothetical protein | ALFI_RS04850 | Not Available | Negative | 1065525 - 1065899 | 13824.6 |
| hypothetical protein | ALFI_RS04855 | Not Available | Negative | 1066945 - 1067310 | 13160.8 |
| putative transporter | ALFI_RS04860 | Not Available | Negative | 1067408 - 1069090 | 59333.8 |
| multidrug dmt transporter permease | ALFI_RS04865 | Not Available | Positive | 1069518 - 1070091 | 21358.8 |
| conjugal transfer protein mobb | ALFI_RS04870 | Not Available | Negative | 1070363 - 1071511 | 44116.1 |
| hypothetical protein | ALFI_RS04875 | Not Available | Negative | 1071559 - 1071978 | 16491.1 |
| para family protein | ALFI_RS04880 | Not Available | Positive | 1072496 - 1073254 | 28668.1 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
