Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | DSM 17242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histone h1 | ALFI_RS04735 | Not Available | Negative | 1041242 - 1041415 | 6463.78 |
| conjugal transfer protein mobc | ALFI_RS04740 | Not Available | Negative | 1041478 - 1043493 | 76297.9 |
| hypothetical protein | ALFI_RS04745 | Not Available | Positive | 1043595 - 1044050 | 17318.8 |
| is3 family transposase | ALFI_RS04750 | Not Available | Positive | 1044047 - 1044937 | 34819.1 |
| rtec domain-containing protein | ALFI_RS17375 | Not Available | Negative | 1045029 - 1045613 | 22363.4 |
| hypothetical protein | ALFI_RS04760 | Not Available | Negative | 1046138 - 1046428 | 11420.0 |
| hypothetical protein | ALFI_RS04765 | Not Available | Negative | 1046462 - 1047748 | 48462.7 |
| duf805 domain-containing protein | ALFI_RS04770 | Not Available | Negative | 1048002 - 1048349 | 13390.0 |
| pepsy-like domain-containing protein | ALFI_RS04775 | Not Available | Negative | 1048533 - 1048994 | 17358.9 |
| pepsy-like domain-containing protein | ALFI_RS04780 | Not Available | Negative | 1049108 - 1049557 | 16563.6 |
Pathways
43 pathways
Health Effects
No health effects information available for this bacterium.
